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Exchange Online saves these emails only in the Delegate’s Sent Items folder. While there is a setting in the interface to change this one user at a time, your need to apply this to "all users in the whole organization" means the standard Admin Center is not practical. You can ask your Admin to use Exchange Online PowerShell (or Cloud Shell) to apply this setting globally.
To ensure that emails sent via Send As and Send on Behalf are saved in the Owner's Sent Items folder for every user in the organization, you can run the following bulk command in PowerShell.
This command selects all user mailboxes and enables the "Copy to Sent Items" feature for both delegation types:
Get-Mailbox -ResultSize Unlimited -RecipientTypeDetails UserMailbox | Set-Mailbox -MessageCopyForSentAsEnabled $true -MessageCopyForSendOnBehalfEnabled $true
This command applies the setting to all existing users. If new employees are hired in the future, the Admin may need to run this command again or include these flags in their new user creation script.
To confirm the settings were applied successfully, the Admin can run this command to view the current status:
Get-Mailbox -ResultSize Unlimited -RecipientTypeDetails UserMailbox | Select-Object Name, MessageCopyForSentAsEnabled, MessageCopyForSendOnBehalfEnabled
For your Admin's reference, here are the official Microsoft articles you can see:
Automatically save sent items in delegator's mailbox in Exchange Online | Microsoft Learn
Set-Mailbox (ExchangePowerShell) | Microsoft Learn
I hope this information helps and provides the necessary references. Please let me know if you have any further questions!
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